Results for "HLA typing from RNA-Seq sequence reads"

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    • Oliver Thewalt

      HLA typing from RNA-Seq sequence reads

      Abstract We present a method, seq2HLA, for obtaining an individual's human leukocyte antigen (HLA) class I and II type and expression using standard next generation sequencing RNA-Seq data. RNA-Seq reads are mapped against a reference database of HLA alleles, and HLA type, confidence score and...

      Tags: HLA typing from RNA-Seq sequence reads